
H& E Image Analysis Specialist
15 hours ago
Job Opportunity: H&E Image Analysis Specialist
We are seeking a skilled and motivated candidate to join our team as an H&E image analysis specialist. The ideal candidate will have a strong background in machine learning and experience with deep learning models.
This role involves the design, development, and training of convolutional neural networks (CNNs) and related machine learning models on H&E-stained histology images. The successful candidate will contribute to the development and optimization of these models to analyze digitized H&E slides for cancer classification and spatial mapping.
The successful candidate will work collaboratively with cross-disciplinary teams to integrate image-based predictions with molecular and clinical data. They will also be responsible for analyzing model performance and contributing to improving accuracy, efficiency, and robustness.
Responsibilities:
- Design, develop, and train CNNs and related ML models on H&E-stained histology images.
- Use and extend tools such as QuPath for cell annotations, segmentation models, and dataset curation.
- Preprocess, annotate, and manage large image datasets to support model training and validation.
- Collaborate with cross-disciplinary teams to integrate image-based predictions with molecular and clinical data.
- Analyze model performance and contribute to improving accuracy, efficiency, and robustness.
- Document research findings and contribute to publications in peer-reviewed journals.
Requirements:
- PhD in Computer Science, Biomedical Engineering, Data Science, Computational Biology, or a related discipline.
- Demonstrated research experience in machine learning, deep learning, or biomedical image analysis (e.g., publications, thesis projects, or conference presentations).
- Strong programming skills in Python and experience with ML frameworks such as TensorFlow or PyTorch.
- Familiarity with digital pathology workflows, image preprocessing/augmentation, and annotation tools.
- Ability to work collaboratively in a multidisciplinary research environment.
Preferred Qualifications:
- Background in cancer histopathology or biomedical image analysis.
- Knowledge of multimodal data integration, including spatial transcriptomics.
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