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4 days ago
We are seeking a highly skilled Scientist - Bioinformatics Data Curation to join our team. As a key member, you will be responsible for conducting searches in public genomic databases, distinguishing different functional genomics technologies, and validating datasets to ensure accuracy and consistency.
- Key Responsibilities:
- Conduct comprehensive searches in public genomic databases (GEO, CellXGene, HumanCell Atlas) to identify relevant datasets.
- Distinguish between various functional genomics technologies and biological experimental methodologies to meet our company's needs.
- Understand the necessary dataset qualifications and enter matching datasets into the database with utmost attention to detail.
- Validate and cross-check new datasets to avoid duplicates or problems.
- Optimize database structure to enhance information flow and support data-driven decision-making.
- Ph.D graduate in computational biology, bioinformatics, single-cell biology, genomics, immunology, biomedical engineering, or a related field.
- Strong technical focus and knowledge of genomics, molecular biology, and technologies such as qPCR and next-generation sequencing.
- Demonstrated proficiency in analyzing large-scale transcriptomics data, especially scRNA-seq.
- Experience identifying outliers for gene expression and splicing from RNA-seq data.
- Experience working with relevant genomic databases and browsers and their annotations.
- Proficiency in Git operations.
- Strong coding and visualization skills using Python or R.
- Experienced in data wrangling using pandas or tidyverse.
- Skilled in Linux command-line interface (CLI) operations.
- Ability to ensure accuracy, spot discrepancies, and deliver steady and reliable results in a given time frame.
- Good command of English speaking and writing.
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