H&E Image Analysis and Spatial Omics Machine Learning Scientist

6 days ago


Cochin, Kerala, India beBeeMachineLearning Full time ₹ 80,00,000 - ₹ 1,50,00,000
Machine Learning Scientist: H&E Image Analysis and Spatial Omics

We are seeking a highly motivated PhD candidate interested in machine learning for histopathology image analysis.

The ideal candidate will contribute to developing and optimizing deep learning models to analyze digitized H&E slides for cancer classification and spatial mapping.

  • Design, develop, and train convolutional neural networks (CNNs) and related ML models on H&E-stained histology images.
  • Use and extend tools such as QuPath for cell annotations, segmentation models, and dataset curation.
  • Preprocess, annotate, and manage large image datasets to support model training and validation.
  • Collaborate with cross-disciplinary teams to integrate image-based predictions with molecular and clinical data.
  • Analyze model performance and contribute to improving accuracy, efficiency, and robustness.
Qualifications:
  • PhD in Computer Science, Biomedical Engineering, Data Science, Computational Biology, or a related discipline.
  • Demonstrated research experience in machine learning, deep learning, or biomedical image analysis.
  • Strong programming skills in Python and experience with ML frameworks such as TensorFlow or PyTorch.
  • Familiarity with digital pathology workflows, image preprocessing/augmentation, and annotation tools.
  • Ability to work collaboratively in a multidisciplinary research environment.
Preferred Qualifications:
  • Background in cancer histopathology or biomedical image analysis.
  • Knowledge of multimodal data integration, including spatial transcriptomics.

This is a great opportunity for researchers aiming to apply advanced computational methods to biomedical challenges.



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