Genomics Data Specialist
3 days ago
Synlico Inc. is a pioneer in transforming biology through the use of causality to explain, predict, and engineer cellular processes.
Our AI platform leverages machine learning & deep learning, causal discovery & inference, and single-cell bioinformatics to unravel the causal relationships between cells' intracellular activities and their responses in the patients' heterogeneous microenvironment.
Predicting how cell modulation alters its behavior in patients, our technology has a broad range of potential vertical applications in drug discovery, including target identification, therapy design, manufacturing, and biomarker discovery.
We are seeking a Genomics Data Specialist (Remote, Contract) to join our team to conduct searches in public databases and distinguish different functional genomics technologies and biological experimental methodologies.
Key Responsibilities:- Conduct searches in public genomic databases (GEO, CellXGene, HumanCell Atlas).
- Distinguish different functional genomics technologies and biological experimental methodologies to match the company's needs.
- Understand necessary dataset qualifications.
- Enter matching datasets to the database accurately with utmost attention.
- Validate/cross-check new datasets to avoid duplicates or problems.
- Optimize database structure to optimize information flow.
The ideal candidate should have a strong focus on modern single-cell gene expression technologies and basic coding skills, demonstrate critical thinking, attention to detail, and consistency in delivering reliable results.
Requirements:- A Ph.D graduate in computational biology, bioinformatics, single-cell biology, genomics, immunology, biomedical engineering, or a related field.
- A strong technical focus and knowledge of genomics, molecular biology, and technologies such as qPCR and next-generation sequencing.
- Demonstrated proficiency in the analysis of large-scale transcriptomics data (especially scRNA-seq).
- Experience identifying outliers for gene expression and splicing from RNA-seq data.
- Experience working with relevant genomic databases and browsers and their annotations.
- Proficiency in Git operations.
- Strong coding and visualization skills using Python or R.
- Experienced in data wrangling using pandas or tidyverse.
- Skilled in Linux command-line interface (CLI) operations.
We offer a competitive CTC of $120,000 per year based on the candidate's experience and technical skill set. The candidate must maintain reliable high-speed (>300 Mbps) internet connections while working.
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