Bioinformatics Specialist

3 weeks ago


India Excelra Full time

Bioinformatics Pipeline Developer

Your Tasks

  • Develop and maintain the Nextflow pipelines for our Online Pipeline Platform, OP².
  • Use your bioinformatics expertise to extend our analytical capabilities
  • Work closely together with our domain experts to transform their knowledge into code
  • Support our customers by investigating pipeline issues and resolving them

Essential Requirements

  • You have a BSc or MSc in an appropriate field (e.g. Bioinformatics, Bioengineering, Computer Science).
  • You have experience developing Bioinformatics pipelines, ideally using Nextflow.
  • You are proficient in Python and R.
  • You can understand basic Bash scripts and find your way around Linux systems.
  • You are proficient in at least one bioinformatics workflow, such as variant calling, transcriptomics, or immune repertoire profiling.
  • You have experience with basic development tools such Git, Docker, and Jira.
  • You apply the best practices from software engineering such as code versioning, clean coding, testing, and containerization.

Desirable Traits

  • You have experience working with AWS (S3, ECR, AWS Batch).
  • You have experience working in cross-functional teams consisting of bioinformaticians and software engineers.
  • You have experience with cloud services for compute, data storage, and containerization.
  • You are eager to learn about various bioinformatics domains such as epigenomics, metagenomics, proteomics, etc.



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